Variant report

Variant rs56270164
Chromosome Location chr1:47856480-47856481
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47847400-47858600 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:47847600-47858800 Weak transcription HSMMtube muscle
3 chr1:47847600-47865200 Weak transcription GM12878-XiMat blood
4 chr1:47847600-47872800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:47849400-47858800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:47853200-47857400 Enhancers HepG2 liver
7 chr1:47853400-47856600 Enhancers Fetal Intestine Large intestine
8 chr1:47853400-47856600 Enhancers Fetal Intestine Small intestine
9 chr1:47854200-47857200 Enhancers Duodenum Mucosa Duodenum
10 chr1:47855000-47858400 Weak transcription HSMM muscle
11 chr1:47855400-47857200 Enhancers Rectal Mucosa Donor 31 rectum
12 chr1:47856000-47856800 Enhancers Sigmoid Colon Sigmoid Colon
13 chr1:47856200-47856800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:47856400-47856600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:47856400-47856600 Enhancers Adipose Nuclei Adipose
16 chr1:47856400-47857000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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