The 2.0 version of rSNPBase

Variant report

Variant rs56320548
Chromosome Location chr1:211807394-211807395
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211803400-211807600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:211803400-211807600 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr1:211803800-211807600 Enhancers Fetal Thymus thymus
4 chr1:211804200-211807600 Enhancers Left Ventricle heart
5 chr1:211804200-211813400 Weak transcription H1 Cell Line embryonic stem cell
6 chr1:211804200-211816600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:211804400-211807400 Enhancers Spleen Spleen
8 chr1:211804400-211809400 Enhancers Hela-S3 cervix
9 chr1:211805400-211807400 Enhancers Osteobl bone
10 chr1:211805400-211808200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:211805400-211808200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:211805600-211807400 Enhancers NH-A brain
13 chr1:211805600-211807800 Enhancers HMEC breast
14 chr1:211805800-211807400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:211805800-211807600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:211805800-211807600 Enhancers Pancreas Pancrea
17 chr1:211805800-211807600 Enhancers HSMMtube muscle
18 chr1:211805800-211808200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:211806200-211807400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:211806200-211807600 Enhancers Liver Liver
21 chr1:211806400-211807400 Enhancers A549 lung
22 chr1:211806400-211807800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:211806600-211807400 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr1:211806800-211809200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:211806800-211809600 Weak transcription Duodenum Mucosa Duodenum
26 chr1:211806800-211809600 Weak transcription Fetal Intestine Small intestine
27 chr1:211806800-211811600 Weak transcription Fetal Intestine Large intestine
28 chr1:211806800-211813000 Weak transcription Stomach Mucosa stomach
29 chr1:211807000-211809600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:211807000-211810600 Weak transcription Placenta Placenta
31 chr1:211807000-211811600 Weak transcription Esophagus oesophagus
32 chr1:211807000-211812000 Weak transcription Adipose Nuclei Adipose
33 chr1:211807000-211816200 Weak transcription Colonic Mucosa Colon
34 chr1:211807000-211816200 Weak transcription Ovary ovary
35 chr1:211807200-211807400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:211807200-211807800 Enhancers K562 blood
37 chr1:211807200-211808000 Enhancers HepG2 liver
38 chr1:211807200-211809400 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:211807200-211809400 Weak transcription HSMM muscle
40 chr1:211807200-211809600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:211807200-211809800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:211807200-211812000 Weak transcription NHLF lung
43 chr1:211807200-211816600 Weak transcription Right Ventricle heart
44 chr1:211807200-211817200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015