The 2.0 version of rSNPBase

Variant report

Variant rs56397997
Chromosome Location chr11:75367289-75367290
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75362200-75368600 Enhancers HSMMtube muscle
2 chr11:75363200-75367600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr11:75364000-75367600 Enhancers Osteobl bone
4 chr11:75364000-75368000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr11:75364000-75368000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:75364000-75368000 Enhancers HMEC breast
7 chr11:75364200-75367800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr11:75364200-75367800 Enhancers HSMM muscle
9 chr11:75364200-75368200 Enhancers NHEK skin
10 chr11:75364400-75368200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:75364400-75368200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr11:75364600-75368000 Enhancers Fetal Heart heart
13 chr11:75364600-75378000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:75365200-75367600 Enhancers NH-A brain
15 chr11:75365200-75368000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr11:75365400-75368000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr11:75365400-75368600 Enhancers Fetal Muscle Leg muscle
18 chr11:75366000-75367800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr11:75366000-75367800 Enhancers Placenta Amnion Placenta Amnion
20 chr11:75366400-75367400 Enhancers Placenta Placenta
21 chr11:75366400-75367400 Enhancers Stomach Smooth Muscle stomach
22 chr11:75366400-75367600 Enhancers Brain Inferior Temporal Lobe brain
23 chr11:75366400-75367600 Enhancers Fetal Brain Female brain
24 chr11:75366400-75367800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr11:75366400-75367800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr11:75366400-75367800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr11:75366400-75367800 Enhancers Left Ventricle heart
28 chr11:75366400-75368000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:75366600-75367400 Enhancers Fetal Stomach stomach
30 chr11:75366600-75367600 Enhancers Aorta Aorta
31 chr11:75366600-75367600 Enhancers Brain Cingulate Gyrus brain
32 chr11:75366600-75367600 Enhancers Brain Hippocampus Middle brain
33 chr11:75366600-75367800 Enhancers Cortex derived primary cultured neurospheres brain
34 chr11:75366600-75367800 Enhancers Rectal Smooth Muscle rectum
35 chr11:75366600-75367800 Enhancers Right Atrium heart
36 chr11:75366600-75368000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:75366800-75367400 Enhancers Colon Smooth Muscle Colon
38 chr11:75366800-75367800 Enhancers Pancreatic Islets Pancreatic Islet
39 chr11:75367000-75367400 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr11:75367000-75367600 Enhancers HUES48 Cell Line embryonic stem cell
41 chr11:75367000-75367600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:75367000-75367800 Enhancers Brain Substantia Nigra brain
43 chr11:75367000-75368000 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr11:75367200-75367600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr11:75367200-75367800 Enhancers NHDF-Ad bronchial
46 chr11:75367200-75374200 Weak transcription Fetal Brain Male brain
47 chr11:75367200-75376400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015