Variant report

Variant	rs56746031
Chromosome Location	chr10:98028156-98028157
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98025433..98027161-chr10:98027788..98030439,2	K562	blood:

rs_ID	r²[population]
rs11813386	1.00[EUR][1000 genomes]
rs12252547	1.00[EUR][1000 genomes]
rs12258827	1.00[EUR][1000 genomes]
rs12260997	1.00[EUR][1000 genomes]
rs12261067	1.00[EUR][1000 genomes]
rs12268870	1.00[EUR][1000 genomes]
rs57155025	1.00[EUR][1000 genomes]
rs58744084	1.00[EUR][1000 genomes]
rs60349635	1.00[EUR][1000 genomes]
rs74153617	1.00[EUR][1000 genomes]
rs74153623	1.00[EUR][1000 genomes]
rs7896411	1.00[EUR][1000 genomes]
rs7916154	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97996400-98029200	Weak transcription	Fetal Stomach	stomach
2	chr10:98019800-98028200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr10:98020000-98029400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:98021000-98029800	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
5	chr10:98023600-98031800	Weak transcription	Small Intestine	intestine
6	chr10:98023800-98032000	Weak transcription	Spleen	Spleen
7	chr10:98024600-98029200	Weak transcription	Placenta	Placenta
8	chr10:98025400-98029400	Enhancers	Stomach Mucosa	stomach
9	chr10:98025800-98028600	Weak transcription	Fetal Kidney	kidney
10	chr10:98026200-98029000	Flanking Active TSS	Liver	Liver
11	chr10:98026200-98033000	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr10:98026400-98028200	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr10:98026400-98028200	Weak transcription	Rectal Smooth Muscle	rectum
14	chr10:98026800-98028200	Weak transcription	Esophagus	oesophagus
15	chr10:98026800-98029000	Enhancers	Fetal Intestine Large	intestine
16	chr10:98026800-98029200	Enhancers	Fetal Intestine Small	intestine
17	chr10:98027000-98029200	Transcr. at gene 5' and 3'	Primary B cells from peripheral blood	blood
18	chr10:98027200-98028200	Weak transcription	Colonic Mucosa	Colon
19	chr10:98027400-98028200	Weak transcription	Brain Hippocampus Middle	brain
20	chr10:98027400-98028200	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr10:98027400-98029200	Weak transcription	Gastric	stomach
22	chr10:98027400-98030800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr10:98027400-98031200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr10:98027600-98028200	Active TSS	Duodenum Mucosa	Duodenum
25	chr10:98027600-98030800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr10:98027600-98030800	Weak transcription	NHEK	skin
27	chr10:98027800-98028200	Weak transcription	HMEC	breast
28	chr10:98027800-98029400	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr10:98028000-98028400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
30	chr10:98028000-98029200	Enhancers	Pancreas	Pancrea
31	chr10:98028000-98029400	Transcr. at gene 5' and 3'	Primary B cells from cord blood	blood

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