Variant report
Variant | rs56848262 |
---|---|
Chromosome Location | chr20:23299081-23299082 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000132661 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11905535 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs11906751 | 1.00[AMR][1000 genomes] |
rs11907155 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2405228 | 1.00[ASN][1000 genomes] |
rs35419581 | 1.00[AMR][1000 genomes] |
rs56752409 | 1.00[ASN][1000 genomes] |
rs57270728 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs57666968 | 1.00[ASN][1000 genomes] |
rs58071233 | 1.00[ASN][1000 genomes] |
rs58496407 | 1.00[ASN][1000 genomes] |
rs58950746 | 1.00[ASN][1000 genomes] |
rs59146474 | 1.00[ASN][1000 genomes] |
rs59371748 | 1.00[ASN][1000 genomes] |
rs59775607 | 1.00[ASN][1000 genomes] |
rs6036373 | 1.00[ASN][1000 genomes] |
rs6048686 | 0.98[ASN][1000 genomes] |
rs60763856 | 1.00[ASN][1000 genomes] |
rs61259462 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs61322006 | 1.00[ASN][1000 genomes] |
rs61594626 | 1.00[ASN][1000 genomes] |
rs7264784 | 1.00[ASN][1000 genomes] |
rs7267816 | 1.00[ASN][1000 genomes] |
rs7269309 | 1.00[ASN][1000 genomes] |
rs7270669 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7270895 | 1.00[ASN][1000 genomes] |
rs7270957 | 1.00[ASN][1000 genomes] |
rs73316999 | 1.00[ASN][1000 genomes] |
rs73319039 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs73319041 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs73904242 | 1.00[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:23285600-23301200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
2 | chr20:23293000-23301000 | Weak transcription | Gastric | stomach |