Variant report

Variant	rs56917287
Chromosome Location	chr5:16070715-16070716
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs55704539	1.00[AMR][1000 genomes]
rs55762424	1.00[AMR][1000 genomes]
rs55792048	1.00[AMR][1000 genomes]
rs55842606	1.00[AMR][1000 genomes]
rs55900820	1.00[AMR][1000 genomes]
rs56804352	1.00[AMR][1000 genomes]
rs57018497	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57456523	1.00[AMR][1000 genomes]
rs57789337	1.00[AMR][1000 genomes]
rs58172920	1.00[AMR][1000 genomes]
rs58451844	1.00[AMR][1000 genomes]
rs58539280	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58700467	1.00[AMR][1000 genomes]
rs59015531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60910436	1.00[AMR][1000 genomes]
rs60964517	1.00[AMR][1000 genomes]
rs61489070	1.00[AMR][1000 genomes]
rs61619084	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6861989	1.00[AMR][1000 genomes]
rs6888839	1.00[AMR][1000 genomes]
rs73752334	1.00[AMR][1000 genomes]
rs73752337	1.00[AMR][1000 genomes]
rs73752342	1.00[AMR][1000 genomes]
rs73752345	1.00[AMR][1000 genomes]
rs73752347	1.00[AMR][1000 genomes]
rs73752348	1.00[AMR][1000 genomes]
rs73752349	1.00[AMR][1000 genomes]
rs73752350	1.00[AMR][1000 genomes]
rs73752351	1.00[AMR][1000 genomes]
rs73752352	1.00[AMR][1000 genomes]
rs73752353	1.00[AMR][1000 genomes]
rs73752354	1.00[AMR][1000 genomes]
rs73752355	1.00[AMR][1000 genomes]
rs73752356	1.00[AMR][1000 genomes]
rs73752357	1.00[AMR][1000 genomes]
rs73752358	1.00[AMR][1000 genomes]
rs73752359	1.00[AMR][1000 genomes]
rs73752360	1.00[AMR][1000 genomes]
rs73752361	1.00[AMR][1000 genomes]
rs73752362	1.00[AMR][1000 genomes]
rs73752365	1.00[AMR][1000 genomes]
rs73752368	1.00[AMR][1000 genomes]
rs73752369	1.00[AMR][1000 genomes]
rs73752370	1.00[AMR][1000 genomes]
rs73752371	1.00[AMR][1000 genomes]
rs73752372	1.00[AMR][1000 genomes]
rs73752373	1.00[AMR][1000 genomes]
rs73752374	1.00[AMR][1000 genomes]
rs73752375	1.00[AMR][1000 genomes]
rs73752378	1.00[AMR][1000 genomes]
rs73752379	1.00[AMR][1000 genomes]
rs73752380	1.00[AMR][1000 genomes]
rs73752381	1.00[AMR][1000 genomes]
rs73752382	1.00[AMR][1000 genomes]
rs73752383	1.00[AMR][1000 genomes]
rs73752384	1.00[AMR][1000 genomes]
rs73752385	1.00[AMR][1000 genomes]
rs73752390	1.00[AMR][1000 genomes]
rs73752397	1.00[AMR][1000 genomes]
rs73752399	1.00[AMR][1000 genomes]
rs73753928	1.00[AMR][1000 genomes]
rs7710993	1.00[AMR][1000 genomes]
rs7730859	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830217	chr5:16004704-16225229	Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:16065000-16080200	Weak transcription	Left Ventricle	heart
2	chr5:16068400-16075400	Weak transcription	Fetal Heart	heart
3	chr5:16069400-16081000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:16070600-16071800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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