Variant report

Variant	rs57125846
Chromosome Location	chr14:79179325-79179326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10150558	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11159377	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11159378	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11845056	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11845058	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12432000	0.81[EUR][1000 genomes]
rs17108125	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17108128	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1863030	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2081340	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55834264	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7143966	0.83[EUR][1000 genomes]
rs72685424	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8013958	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs970465	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79165000-79181000	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr14:79176000-79189000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:79176600-79188600	Weak transcription	Brain Anterior Caudate	brain
4	chr14:79177000-79188400	Weak transcription	Brain Angular Gyrus	brain
5	chr14:79177200-79187400	Weak transcription	Brain Germinal Matrix	brain
6	chr14:79177200-79188000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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