Variant report

Variant	rs55834264
Chromosome Location	chr14:79195201-79195202
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10150558	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11159377	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11159378	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11845056	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11845058	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12101009	0.97[ASN][1000 genomes]
rs12432000	0.95[ASN][1000 genomes]
rs17108125	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17108128	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1863030	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2081340	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57125846	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7143966	0.81[EUR][1000 genomes]
rs72685424	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8005048	0.97[ASN][1000 genomes]
rs8013958	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs970465	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79189400-79198200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:79190000-79200200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:79192000-79198200	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr14:79192200-79198400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr14:79192400-79197400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr14:79192400-79198200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr14:79192400-79198200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr14:79192400-79198200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr14:79193400-79198200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr14:79193800-79198400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr14:79193800-79203400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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