The 2.0 version of rSNPBase

Variant report

Variant rs57132942
Chromosome Location chr3:119667776-119667777
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119608200-119677800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr3:119611400-119682200 Weak transcription HSMMtube muscle
3 chr3:119625000-119668200 Weak transcription Hela-S3 cervix
4 chr3:119629600-119672200 Weak transcription Fetal Stomach stomach
5 chr3:119630800-119697400 Weak transcription Thymus Thymus
6 chr3:119631000-119717000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:119640600-119672400 Weak transcription Osteobl bone
8 chr3:119641000-119681600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr3:119641000-119681600 Weak transcription Fetal Intestine Small intestine
10 chr3:119641000-119694400 Weak transcription Fetal Lung lung
11 chr3:119641200-119681200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr3:119645400-119669600 Weak transcription Psoas Muscle Psoas
13 chr3:119650200-119669800 Weak transcription Liver Liver
14 chr3:119650400-119669600 Weak transcription Left Ventricle heart
15 chr3:119653600-119669600 Weak transcription Ovary ovary
16 chr3:119656400-119669400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:119656400-119680600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr3:119656400-119681200 Weak transcription Primary hematopoietic stem cells blood
19 chr3:119656400-119700000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr3:119656600-119669800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr3:119656600-119718400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:119658000-119669800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr3:119658200-119669000 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr3:119658200-119669400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr3:119658200-119669600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr3:119658400-119669400 Weak transcription Brain Angular Gyrus brain
27 chr3:119658400-119688400 Weak transcription NHEK skin
28 chr3:119658400-119688600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr3:119662000-119684800 Weak transcription Rectal Smooth Muscle rectum
30 chr3:119662400-119700400 Weak transcription Fetal Intestine Large intestine
31 chr3:119663200-119669600 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr3:119663600-119669400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:119663600-119681200 Weak transcription Primary T cells from cord blood blood
34 chr3:119664000-119669600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr3:119664000-119695000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr3:119664200-119668400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr3:119664200-119674400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr3:119664600-119673600 Weak transcription Small Intestine intestine
39 chr3:119664600-119700200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr3:119664600-119702400 Weak transcription Primary T cells fromperipheralblood blood
41 chr3:119664800-119668800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr3:119664800-119669600 Weak transcription Fetal Heart heart
43 chr3:119665200-119669200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr3:119665600-119669200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr3:119665800-119670000 Weak transcription GM12878-XiMat blood
46 chr3:119665800-119671000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr3:119665800-119697400 Weak transcription Primary B cells from peripheral blood blood
48 chr3:119665800-119716800 Weak transcription HSMM muscle
49 chr3:119666000-119669600 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr3:119666000-119669600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015