The 2.0 version of rSNPBase

Variant report

Variant rs6796550
Chromosome Location chr3:119725328-119725329
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119693600-119732200 Weak transcription A549 lung
2 chr3:119710200-119730800 Weak transcription Rectal Smooth Muscle rectum
3 chr3:119711400-119729200 Weak transcription Colon Smooth Muscle Colon
4 chr3:119712000-119732200 Weak transcription HepG2 liver
5 chr3:119712200-119732400 Weak transcription NHLF lung
6 chr3:119712600-119745000 Weak transcription Hela-S3 cervix
7 chr3:119712800-119732200 Weak transcription Duodenum Mucosa Duodenum
8 chr3:119713200-119744400 Weak transcription Fetal Kidney kidney
9 chr3:119717400-119730200 Weak transcription Brain Anterior Caudate brain
10 chr3:119717600-119732200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr3:119718200-119736800 Weak transcription Liver Liver
12 chr3:119719000-119729800 Weak transcription Brain Substantia Nigra brain
13 chr3:119719600-119730000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:119720200-119731800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr3:119720200-119736600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr3:119720200-119741000 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:119720400-119729600 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr3:119720400-119730400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:119720400-119737200 Weak transcription NHDF-Ad bronchial
20 chr3:119720800-119730200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr3:119720800-119738600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:119721000-119731200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:119721000-119731200 Weak transcription Fetal Lung lung
24 chr3:119721400-119733600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr3:119723000-119730000 Weak transcription Brain Inferior Temporal Lobe brain
26 chr3:119723200-119730000 Weak transcription Brain Hippocampus Middle brain
27 chr3:119723200-119734800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:119723200-119736200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:119723400-119730400 Weak transcription Small Intestine intestine
30 chr3:119723400-119731800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:119723600-119729800 Weak transcription Left Ventricle heart
32 chr3:119723600-119731400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr3:119723600-119731800 Weak transcription Right Ventricle heart
34 chr3:119723600-119740600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:119724000-119730000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr3:119724000-119731200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr3:119724000-119736800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr3:119724000-119738200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr3:119724000-119741400 Weak transcription Thymus Thymus
40 chr3:119724200-119729200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr3:119724200-119734600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr3:119724400-119731400 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015