Variant report

Variant	rs57184962
Chromosome Location	chr2:63774517-63774518
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17028099	1.00[ASN][1000 genomes]
rs17554748	1.00[ASN][1000 genomes]
rs1878506	1.00[ASN][1000 genomes]
rs28838707	1.00[ASN][1000 genomes]
rs56342040	1.00[ASN][1000 genomes]
rs57120200	1.00[ASN][1000 genomes]
rs57329063	1.00[ASN][1000 genomes]
rs57413391	1.00[ASN][1000 genomes]
rs57844293	1.00[ASN][1000 genomes]
rs58208651	1.00[ASN][1000 genomes]
rs58422338	1.00[ASN][1000 genomes]
rs58472560	1.00[ASN][1000 genomes]
rs58495096	1.00[ASN][1000 genomes]
rs62138760	1.00[ASN][1000 genomes]
rs62138819	1.00[ASN][1000 genomes]
rs62138820	1.00[ASN][1000 genomes]
rs6717478	1.00[ASN][1000 genomes]
rs6751397	1.00[ASN][1000 genomes]
rs73937260	1.00[ASN][1000 genomes]
rs73937264	1.00[ASN][1000 genomes]
rs73937268	1.00[ASN][1000 genomes]
rs7582457	1.00[ASN][1000 genomes]
rs7601187	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1800788	chr2:63473443-63900292	ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63768600-63777400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr2:63772800-63788800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr2:63773200-63783200	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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