Variant report
Variant | rs17028099 |
---|---|
Chromosome Location | chr2:63918055-63918056 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000169764 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs13431437 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
rs17554748 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28838707 | 1.00[ASN][1000 genomes] |
rs3924029 | 1.00[ASN][1000 genomes] |
rs55748575 | 1.00[ASN][1000 genomes] |
rs56342040 | 1.00[ASN][1000 genomes] |
rs57120200 | 1.00[ASN][1000 genomes] |
rs57184962 | 1.00[ASN][1000 genomes] |
rs57329063 | 1.00[ASN][1000 genomes] |
rs57413391 | 0.86[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs57844293 | 1.00[ASN][1000 genomes] |
rs57877849 | 1.00[ASN][1000 genomes] |
rs58208651 | 1.00[ASN][1000 genomes] |
rs58422338 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs58472560 | 1.00[ASN][1000 genomes] |
rs58495096 | 1.00[ASN][1000 genomes] |
rs59540641 | 1.00[ASN][1000 genomes] |
rs62136361 | 1.00[ASN][1000 genomes] |
rs62136364 | 1.00[ASN][1000 genomes] |
rs62136366 | 1.00[ASN][1000 genomes] |
rs62136367 | 1.00[ASN][1000 genomes] |
rs62136369 | 1.00[ASN][1000 genomes] |
rs62136391 | 1.00[ASN][1000 genomes] |
rs62138760 | 1.00[ASN][1000 genomes] |
rs62138819 | 1.00[ASN][1000 genomes] |
rs62138820 | 1.00[ASN][1000 genomes] |
rs62138822 | 1.00[ASN][1000 genomes] |
rs62138823 | 1.00[ASN][1000 genomes] |
rs62138824 | 1.00[ASN][1000 genomes] |
rs6717478 | 1.00[ASN][1000 genomes] |
rs6745518 | 1.00[ASN][1000 genomes] |
rs6751397 | 1.00[ASN][1000 genomes] |
rs73937260 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73937264 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73937268 | 1.00[ASN][1000 genomes] |
rs7582457 | 1.00[ASN][1000 genomes] |
rs7601187 | 1.00[ASN][1000 genomes] |
rs7606341 | 1.00[CHB][hapmap];1.00[CHD][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv834242 | chr2:63891249-64045617 | Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:63908800-63923400 | Weak transcription | Adipose Nuclei | Adipose |
2 | chr2:63909200-63925600 | Weak transcription | Psoas Muscle | Psoas |