The 2.0 version of rSNPBase

Variant report

Variant rs55748575
Chromosome Location chr2:64131526-64131527
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64114000-64212000 Weak transcription Small Intestine intestine
2 chr2:64114200-64174800 Weak transcription Right Ventricle heart
3 chr2:64116800-64138600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:64118200-64153600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:64118400-64137800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr2:64119200-64132800 Weak transcription Brain Hippocampus Middle brain
7 chr2:64119400-64133200 Weak transcription Brain Anterior Caudate brain
8 chr2:64119600-64139600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr2:64126000-64138000 Weak transcription Brain Angular Gyrus brain
10 chr2:64126200-64138800 Weak transcription Brain Cingulate Gyrus brain
11 chr2:64126800-64132400 Weak transcription K562 blood
12 chr2:64127000-64132600 Weak transcription Liver Liver
13 chr2:64127000-64133200 Weak transcription Placenta Placenta
14 chr2:64127200-64138000 Weak transcription HSMMtube muscle
15 chr2:64127400-64138600 Weak transcription Psoas Muscle Psoas
16 chr2:64128200-64132200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:64128200-64134000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr2:64128400-64132000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:64128600-64132200 ZNF genes & repeats Primary hematopoietic stem cells blood
20 chr2:64128600-64133200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr2:64129200-64138000 Weak transcription Left Ventricle heart
22 chr2:64129400-64133800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:64129600-64133200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:64129600-64133200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:64129600-64138200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr2:64129600-64138200 Weak transcription NH-A brain
27 chr2:64129600-64139000 Weak transcription Spleen Spleen
28 chr2:64129600-64153200 Weak transcription Thymus Thymus
29 chr2:64129600-64153600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:64129600-64153600 Weak transcription Aorta Aorta
31 chr2:64129600-64153600 Weak transcription Pancreas Pancrea
32 chr2:64129600-64154000 Weak transcription Colonic Mucosa Colon
33 chr2:64129600-64164000 Weak transcription NHLF lung
34 chr2:64129600-64201000 Weak transcription Hela-S3 cervix
35 chr2:64129800-64134600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:64129800-64135200 Weak transcription Osteobl bone
37 chr2:64129800-64154200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr2:64130000-64132200 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr2:64130000-64133200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:64130000-64138000 Weak transcription Lung lung
41 chr2:64130000-64153200 Weak transcription Gastric stomach
42 chr2:64130000-64153600 Weak transcription Rectal Smooth Muscle rectum
43 chr2:64130000-64153800 Weak transcription Esophagus oesophagus
44 chr2:64130200-64132800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr2:64130200-64134400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr2:64130200-64137800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr2:64130200-64138200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:64130200-64149200 Strong transcription Primary monocytes fromperipheralblood blood
49 chr2:64130200-64153200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:64130200-64153600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015