Variant report

Variant	rs57266835
Chromosome Location	chr1:165455402-165455403
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs16848958	1.00[EUR][1000 genomes]
rs16849238	1.00[EUR][1000 genomes]
rs58365780	1.00[EUR][1000 genomes]
rs58659239	1.00[EUR][1000 genomes]
rs60308920	1.00[EUR][1000 genomes]
rs73021007	1.00[AMR][1000 genomes]
rs73027023	1.00[EUR][1000 genomes]
rs73027060	1.00[EUR][1000 genomes]
rs73028710	1.00[EUR][1000 genomes]
rs9333396	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947508	chr1:165445780-165455520	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165451800-165459000	Weak transcription	Left Ventricle	heart
2	chr1:165453200-165456400	Enhancers	Fetal Heart	heart
3	chr1:165453600-165455600	Weak transcription	Psoas Muscle	Psoas
4	chr1:165454000-165459400	Weak transcription	Fetal Muscle Leg	muscle
5	chr1:165454000-165461400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:165454200-165456000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr1:165454800-165455800	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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