Variant report

Variant	rs57305564
Chromosome Location	chr6:77920415-77920416
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017082	chr6:77585310-78258237	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3417770	chr6:77670473-77963253	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3402238	chr6:77670497-77963278	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1022311	chr6:77684420-77941524	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv886223	chr6:77686247-77950949	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1033731	chr6:77750293-77941524	Genic enhancers Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv538323	chr6:77750293-77941524	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	nsv534282	chr6:77764575-78351994	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
9	nsv1034979	chr6:77781244-78426249	Active TSS Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	nsv538324	chr6:77781244-78426249	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	esv2753543	chr6:77791848-78059351	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Genic enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv1015307	chr6:77902559-78352291	Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
13	nsv603808	chr6:77918905-77949743	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv9430	chr6:77919837-77920661	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv2022111	chr6:77919930-77920604	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3508833	chr6:77919991-77920505	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3472861	chr6:77920007-77920513	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv3508835	chr6:77920013-77920535	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3508834	chr6:77920026-77920485	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3472864	chr6:77920042-77920479	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv3508836	chr6:77920045-77920464	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	esv3472862	chr6:77920046-77920511	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv3472865	chr6:77920059-77920458	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv3364142	chr6:77920065-77920434	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv3508832	chr6:77920072-77920474	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv3472866	chr6:77920086-77920415	Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv3472867	chr6:77920100-77920432	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv3508837	chr6:77920100-77920432	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv1535032	chr6:77920120-77920431	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:77916200-77925800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:77916400-77926200	Weak transcription	HUVEC	blood vessel

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