Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:95253673..95254779-chr4:95311169..95313000,5	MCF-7	breast:
2	chr4:94713408..94714041-chr4:95312097..95312627,2	K562	blood:
3	chr4:95312028..95313643-chr4:95322019..95323569,2	K562	blood:
4	chr4:95225327..95226247-chr4:95311667..95312502,7	MCF-7	breast:
5	chr4:95254030..95254909-chr4:95311486..95312552,3	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10213307	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12108275	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12108452	0.95[EUR][1000 genomes]
rs13434411	0.80[EUR][1000 genomes]
rs13435514	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17021533	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17376684	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17376943	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17377951	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17623524	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs28469826	0.80[EUR][1000 genomes]
rs28497379	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs28501313	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs28593606	0.82[EUR][1000 genomes]
rs28713352	0.81[EUR][1000 genomes]
rs28806238	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56943028	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6827383	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6827755	0.97[EUR][1000 genomes]
rs6828270	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7658873	0.95[EUR][1000 genomes]
rs7670371	0.87[EUR][1000 genomes]
rs7677981	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7685653	0.82[EUR][1000 genomes]
rs7692439	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7696494	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9993839	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv993495	chr4:94992315-95482578	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv594901	chr4:95254730-95493246	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1003743	chr4:95255957-95469831	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:95311800-95312800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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