Variant report

Variant	rs57506664
Chromosome Location	chr6:54674789-54674790
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10807479	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10807481	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12197981	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1393777	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1503151	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1503152	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1604672	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35839415	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4712072	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4712074	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6901946	0.80[ASN][1000 genomes]
rs6901963	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6926214	0.80[ASN][1000 genomes]
rs6934377	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7738681	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7760610	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7760890	0.80[ASN][1000 genomes]
rs7761084	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9349733	0.83[EUR][1000 genomes]
rs9367591	0.80[ASN][1000 genomes]
rs9464137	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9475010	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9475014	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs952188	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885900	chr6:54517968-54852462	Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54674200-54678800	Weak transcription	Fetal Heart	heart

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