The 2.0 version of rSNPBase

Variant report

Variant rs57580585
Chromosome Location chr6:144711917-144711918
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144690800-144712800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:144691600-144713800 Weak transcription Thymus Thymus
3 chr6:144697000-144714800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:144697200-144732600 Weak transcription Gastric stomach
5 chr6:144700600-144719200 Weak transcription Ovary ovary
6 chr6:144700800-144712200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:144700800-144712200 Weak transcription Right Ventricle heart
8 chr6:144700800-144716000 Weak transcription NHLF lung
9 chr6:144700800-144719000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:144700800-144719000 Weak transcription Esophagus oesophagus
11 chr6:144700800-144719000 Weak transcription Spleen Spleen
12 chr6:144702800-144713000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr6:144702800-144720600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:144703200-144713400 Weak transcription Primary T cells from cord blood blood
15 chr6:144703200-144719000 Weak transcription Fetal Muscle Leg muscle
16 chr6:144703400-144714000 Weak transcription Fetal Thymus thymus
17 chr6:144703400-144717600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:144703800-144718600 Weak transcription Primary hematopoietic stem cells blood
19 chr6:144704000-144718400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr6:144704000-144719000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:144705200-144714600 Weak transcription GM12878-XiMat blood
22 chr6:144705600-144713400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr6:144705800-144712200 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr6:144705800-144722600 Weak transcription Psoas Muscle Psoas
25 chr6:144706200-144712200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr6:144706200-144718200 Weak transcription Fetal Intestine Small intestine
27 chr6:144706800-144712200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr6:144707600-144712200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:144707600-144712200 Weak transcription Left Ventricle heart
30 chr6:144707600-144712800 Weak transcription Lung lung
31 chr6:144707600-144716000 Weak transcription Osteobl bone
32 chr6:144707600-144717800 Weak transcription Dnd41 blood
33 chr6:144707600-144719000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:144707600-144719000 Weak transcription Aorta Aorta
35 chr6:144707600-144719000 Weak transcription Pancreas Pancrea
36 chr6:144708400-144715800 Weak transcription Muscle Satellite Cultured Cells --
37 chr6:144708400-144716200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:144708800-144713000 Strong transcription Primary B cells from cord blood blood
39 chr6:144709000-144716400 Weak transcription Primary monocytes fromperipheralblood blood
40 chr6:144709000-144716800 Weak transcription Adipose Nuclei Adipose
41 chr6:144709000-144719200 Weak transcription Fetal Kidney kidney
42 chr6:144709200-144715000 Weak transcription Primary B cells from peripheral blood blood
43 chr6:144709400-144718400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:144709600-144718400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:144710000-144712200 Weak transcription Primary T cells fromperipheralblood blood
46 chr6:144710000-144716400 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:144710200-144719000 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr6:144710400-144712400 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr6:144710400-144713400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr6:144710600-144716000 Weak transcription HSMM muscle

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Last update: Aug 31, 2015