The 2.0 version of rSNPBase

Variant report

Variant rs57590663
Chromosome Location chr3:46143449-46143450
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46129200-46147400 Enhancers Primary monocytes fromperipheralblood blood
2 chr3:46129400-46154200 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr3:46131400-46152200 Weak transcription Pancreas Pancrea
4 chr3:46139200-46150600 Weak transcription Lung lung
5 chr3:46140400-46144000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr3:46140400-46144400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr3:46140400-46146000 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:46140400-46149200 Weak transcription NHLF lung
9 chr3:46140400-46150000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr3:46140600-46144000 Weak transcription NHDF-Ad bronchial
11 chr3:46140600-46144200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:46140600-46146200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr3:46140600-46150000 Weak transcription Hela-S3 cervix
14 chr3:46140600-46150000 Weak transcription HMEC breast
15 chr3:46140800-46150000 Weak transcription Duodenum Mucosa Duodenum
16 chr3:46141000-46144000 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:46141000-46146000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr3:46141000-46148800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr3:46141000-46150200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr3:46141200-46144200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr3:46141200-46144400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:46141200-46145800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr3:46142000-46145200 Weak transcription Dnd41 blood
24 chr3:46142200-46143800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr3:46142600-46143800 Weak transcription Fetal Thymus thymus
26 chr3:46142600-46144200 Weak transcription Primary T cells fromperipheralblood blood
27 chr3:46142600-46146000 Weak transcription Primary B cells from peripheral blood blood
28 chr3:46142800-46147400 Enhancers Primary neutrophils fromperipheralblood blood
29 chr3:46143000-46145800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr3:46143200-46146200 Weak transcription Primary B cells from cord blood blood
31 chr3:46143200-46150600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:46143400-46146000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr3:46143400-46147400 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015