Variant report

Variant	rs57610492
Chromosome Location	chr8:92570822-92570823
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs13268229	0.82[ASN][1000 genomes]
rs1457052	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16913807	0.82[ASN][1000 genomes]
rs16914149	0.82[ASN][1000 genomes]
rs28735086	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56160120	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56318259	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57453564	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58830410	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58888435	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs59075912	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6471282	0.83[ASN][1000 genomes]
rs67764740	0.82[ASN][1000 genomes]
rs73309604	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73309653	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73309657	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73309674	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7832321	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9649975	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029962	chr8:92560661-92753342	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:92570000-92571000	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr8:92570400-92571000	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr8:92570600-92571000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
4	chr8:92570600-92571000	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr8:92570600-92571000	Active TSS	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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