The 2.0 version of rSNPBase

Variant report

Variant rs57828996
Chromosome Location chr3:119057410-119057411
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119042800-119070600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr3:119042800-119072000 Weak transcription Thymus Thymus
3 chr3:119043000-119069000 Weak transcription Primary T cells from cord blood blood
4 chr3:119043200-119062400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr3:119046000-119064200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:119046000-119064600 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:119048800-119062800 Weak transcription Osteobl bone
8 chr3:119049200-119062200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:119049200-119071200 Weak transcription Aorta Aorta
10 chr3:119049600-119068000 Weak transcription NH-A brain
11 chr3:119050000-119062000 Weak transcription Placenta Placenta
12 chr3:119050800-119064600 Weak transcription HSMMtube muscle
13 chr3:119050800-119075800 Weak transcription Pancreas Pancrea
14 chr3:119051000-119064800 Weak transcription Muscle Satellite Cultured Cells --
15 chr3:119052000-119059400 Weak transcription HUVEC blood vessel
16 chr3:119052000-119062000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr3:119052000-119064600 Weak transcription Fetal Intestine Small intestine
18 chr3:119052600-119064200 Weak transcription Brain Cingulate Gyrus brain
19 chr3:119053200-119064800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr3:119053200-119087200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:119053400-119064400 Weak transcription Psoas Muscle Psoas
22 chr3:119053400-119064400 Weak transcription Spleen Spleen
23 chr3:119053400-119068200 Weak transcription Right Ventricle heart
24 chr3:119053400-119087000 Weak transcription Fetal Muscle Trunk muscle
25 chr3:119053600-119059200 Weak transcription Ovary ovary
26 chr3:119053600-119064200 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr3:119053600-119067800 Weak transcription Fetal Lung lung
28 chr3:119053600-119071400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:119053800-119059600 Weak transcription Adipose Nuclei Adipose
30 chr3:119054600-119057600 Weak transcription Fetal Heart heart
31 chr3:119054600-119059200 Weak transcription Left Ventricle heart
32 chr3:119054600-119059400 Weak transcription Lung lung
33 chr3:119054600-119062400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr3:119056200-119062200 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr3:119056400-119057800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:119056400-119058400 Weak transcription GM12878-XiMat blood
37 chr3:119056400-119059200 Weak transcription Fetal Stomach stomach
38 chr3:119056400-119061600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr3:119056400-119064200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr3:119056400-119067800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:119056400-119068200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr3:119056400-119071600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:119056600-119057600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:119056600-119057800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr3:119056600-119062200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr3:119056600-119064400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr3:119057000-119058000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:119057000-119064800 Weak transcription HSMM muscle
49 chr3:119057200-119057800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:119057400-119057800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015