Variant report

Variant rs578324
Chromosome Location chr11:85461609-85461610
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:85430400-85480400 Weak transcription Aorta Aorta
2 chr11:85431800-85466600 Weak transcription Brain Substantia Nigra brain
3 chr11:85448000-85463600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr11:85448000-85480600 Weak transcription Fetal Stomach stomach
5 chr11:85449200-85478400 Weak transcription Right Ventricle heart
6 chr11:85452000-85462600 Weak transcription HSMMtube muscle
7 chr11:85452400-85461800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:85452800-85463000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:85453000-85471000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr11:85454200-85462600 Weak transcription Left Ventricle heart
11 chr11:85455000-85470800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:85455800-85461800 Enhancers Stomach Mucosa stomach
13 chr11:85456800-85468600 Weak transcription Psoas Muscle Psoas
14 chr11:85457000-85462600 Weak transcription Pancreas Pancrea
15 chr11:85457000-85469000 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr11:85457000-85469000 Weak transcription Gastric stomach
17 chr11:85457400-85466400 Weak transcription Colonic Mucosa Colon
18 chr11:85457600-85466400 Weak transcription Fetal Intestine Small intestine
19 chr11:85457800-85466400 Weak transcription Fetal Intestine Large intestine
20 chr11:85459000-85462000 Enhancers H9 Cell Line embryonic stem cell
21 chr11:85459200-85462000 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr11:85459200-85462000 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr11:85459200-85462000 Enhancers Osteobl bone
24 chr11:85459200-85462200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr11:85459200-85463400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:85459400-85470600 Weak transcription HSMM muscle
27 chr11:85459800-85470600 Weak transcription NHEK skin
28 chr11:85460000-85461800 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr11:85460000-85465200 Enhancers Primary hematopoietic stem cells blood
30 chr11:85460200-85462000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr11:85460200-85463000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr11:85460200-85463000 Enhancers Primary T helper cells fromperipheralblood blood
33 chr11:85460200-85463400 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr11:85460400-85461800 Enhancers Placenta Placenta
35 chr11:85460400-85463000 Enhancers NHLF lung
36 chr11:85460400-85463400 Enhancers Primary T cells fromperipheralblood blood
37 chr11:85460400-85463400 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr11:85460400-85463600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr11:85460400-85463800 Bivalent Enhancer Fetal Thymus thymus
40 chr11:85460400-85463800 Enhancers NHDF-Ad bronchial
41 chr11:85460400-85464200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr11:85460400-85465200 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr11:85460600-85461800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
44 chr11:85460600-85463800 Enhancers Duodenum Mucosa Duodenum
45 chr11:85460600-85464200 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr11:85460600-85483800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr11:85460800-85461800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr11:85460800-85461800 Enhancers Fetal Muscle Leg muscle
49 chr11:85460800-85463200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr11:85460800-85463800 Enhancers Fetal Heart heart

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