Variant report

Variant rs688741
Chromosome Location chr11:85462141-85462142
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:85430400-85480400 Weak transcription Aorta Aorta
2 chr11:85431800-85466600 Weak transcription Brain Substantia Nigra brain
3 chr11:85448000-85463600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr11:85448000-85480600 Weak transcription Fetal Stomach stomach
5 chr11:85449200-85478400 Weak transcription Right Ventricle heart
6 chr11:85452000-85462600 Weak transcription HSMMtube muscle
7 chr11:85452800-85463000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr11:85453000-85471000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:85454200-85462600 Weak transcription Left Ventricle heart
10 chr11:85455000-85470800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:85456800-85468600 Weak transcription Psoas Muscle Psoas
12 chr11:85457000-85462600 Weak transcription Pancreas Pancrea
13 chr11:85457000-85469000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr11:85457000-85469000 Weak transcription Gastric stomach
15 chr11:85457400-85466400 Weak transcription Colonic Mucosa Colon
16 chr11:85457600-85466400 Weak transcription Fetal Intestine Small intestine
17 chr11:85457800-85466400 Weak transcription Fetal Intestine Large intestine
18 chr11:85459200-85462200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr11:85459200-85463400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr11:85459400-85470600 Weak transcription HSMM muscle
21 chr11:85459800-85470600 Weak transcription NHEK skin
22 chr11:85460000-85465200 Enhancers Primary hematopoietic stem cells blood
23 chr11:85460200-85463000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr11:85460200-85463000 Enhancers Primary T helper cells fromperipheralblood blood
25 chr11:85460200-85463400 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr11:85460400-85463000 Enhancers NHLF lung
27 chr11:85460400-85463400 Enhancers Primary T cells fromperipheralblood blood
28 chr11:85460400-85463400 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr11:85460400-85463600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:85460400-85463800 Bivalent Enhancer Fetal Thymus thymus
31 chr11:85460400-85463800 Enhancers NHDF-Ad bronchial
32 chr11:85460400-85464200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr11:85460400-85465200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr11:85460600-85463800 Enhancers Duodenum Mucosa Duodenum
35 chr11:85460600-85464200 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr11:85460600-85483800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr11:85460800-85463200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr11:85460800-85463800 Enhancers Fetal Heart heart
39 chr11:85460800-85464000 Enhancers Primary mononuclear cells fromperipheralblood Blood
40 chr11:85461000-85463200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr11:85461000-85463800 Enhancers Fetal Lung lung
42 chr11:85461200-85462400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr11:85461200-85463000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:85461200-85464200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr11:85461400-85463400 Enhancers Small Intestine intestine
46 chr11:85461400-85464600 Enhancers Spleen Spleen
47 chr11:85461600-85462600 Enhancers Primary T helper naive cells from peripheral blood blood
48 chr11:85461600-85463000 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr11:85461600-85464000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr11:85461600-85464400 Enhancers Lung lung

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