Variant report

Variant rs613973
Chromosome Location chr11:85460909-85460910
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:85430400-85480400 Weak transcription Aorta Aorta
2 chr11:85431800-85466600 Weak transcription Brain Substantia Nigra brain
3 chr11:85442200-85461000 Weak transcription Brain Cingulate Gyrus brain
4 chr11:85444400-85461600 Weak transcription Lung lung
5 chr11:85448000-85463600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr11:85448000-85480600 Weak transcription Fetal Stomach stomach
7 chr11:85449200-85478400 Weak transcription Right Ventricle heart
8 chr11:85452000-85462600 Weak transcription HSMMtube muscle
9 chr11:85452400-85461800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:85452800-85463000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr11:85453000-85471000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr11:85454200-85461000 Weak transcription Fetal Lung lung
13 chr11:85454200-85462600 Weak transcription Left Ventricle heart
14 chr11:85455000-85470800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr11:85455800-85461800 Enhancers Stomach Mucosa stomach
16 chr11:85456800-85468600 Weak transcription Psoas Muscle Psoas
17 chr11:85457000-85461400 Weak transcription Spleen Spleen
18 chr11:85457000-85462600 Weak transcription Pancreas Pancrea
19 chr11:85457000-85469000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr11:85457000-85469000 Weak transcription Gastric stomach
21 chr11:85457400-85466400 Weak transcription Colonic Mucosa Colon
22 chr11:85457600-85466400 Weak transcription Fetal Intestine Small intestine
23 chr11:85457800-85461400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:85457800-85466400 Weak transcription Fetal Intestine Large intestine
25 chr11:85458600-85461600 Enhancers H1 Cell Line embryonic stem cell
26 chr11:85458800-85461400 Strong transcription Rectal Mucosa Donor 31 rectum
27 chr11:85459000-85461600 Enhancers A549 lung
28 chr11:85459000-85462000 Enhancers H9 Cell Line embryonic stem cell
29 chr11:85459200-85461600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr11:85459200-85462000 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr11:85459200-85462000 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr11:85459200-85462000 Enhancers Osteobl bone
33 chr11:85459200-85462200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr11:85459200-85463400 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr11:85459400-85461000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr11:85459400-85461200 Enhancers HUES64 Cell Line embryonic stem cell
37 chr11:85459400-85461200 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr11:85459400-85461600 Enhancers HUES6 Cell Line embryonic stem cell
39 chr11:85459400-85470600 Weak transcription HSMM muscle
40 chr11:85459800-85461000 Enhancers Primary T helper cells PMA-I stimulated --
41 chr11:85459800-85470600 Weak transcription NHEK skin
42 chr11:85460000-85461800 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr11:85460000-85465200 Enhancers Primary hematopoietic stem cells blood
44 chr11:85460200-85461000 Weak transcription NH-A brain
45 chr11:85460200-85462000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
46 chr11:85460200-85463000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr11:85460200-85463000 Enhancers Primary T helper cells fromperipheralblood blood
48 chr11:85460200-85463400 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr11:85460400-85461000 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr11:85460400-85461000 Enhancers Small Intestine intestine

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