Variant report

Variant	rs57874690
Chromosome Location	chr5:35513522-35513523
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10213837	0.80[EUR][1000 genomes]
rs10472966	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1396386	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16902178	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17252095	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17252130	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17252290	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17318782	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs176269	0.85[EUR][1000 genomes]
rs2397844	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs435331	0.84[EUR][1000 genomes]
rs73747466	0.95[ASN][1000 genomes]
rs764912	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027038	chr5:35503887-35556247	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv597812	chr5:35505682-35577257	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35513400-35514600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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