The 2.0 version of rSNPBase

Variant report

Variant rs57955693
Chromosome Location chr1:86897675-86897676
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86890600-86903000 Weak transcription Esophagus oesophagus
2 chr1:86894400-86900200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:86895000-86898800 Weak transcription Spleen Spleen
4 chr1:86896400-86901800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:86896600-86901800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:86896600-86902600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:86896600-86914400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:86897000-86900200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:86897200-86898800 Weak transcription NHDF-Ad bronchial
10 chr1:86897200-86922600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:86897200-86922800 Strong transcription HMEC breast
12 chr1:86897400-86899600 Weak transcription Fetal Lung lung
13 chr1:86897400-86901800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:86897400-86906200 Strong transcription NHEK skin
15 chr1:86897400-86916000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:86897600-86897800 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015