Variant report

Variant rs12047304
Chromosome Location chr1:86854686-86854687
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86815200-86860200 Weak transcription Fetal Brain Male brain
2 chr1:86820200-86854800 Weak transcription HSMMtube muscle
3 chr1:86820400-86860200 Weak transcription NHEK skin
4 chr1:86836600-86860800 Weak transcription Aorta Aorta
5 chr1:86840600-86859600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:86841000-86859800 Weak transcription HSMM muscle
7 chr1:86841600-86859800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:86841800-86855000 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:86843400-86855000 Weak transcription Brain Cingulate Gyrus brain
10 chr1:86843400-86860800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:86843600-86858600 Weak transcription Brain Hippocampus Middle brain
12 chr1:86843600-86859200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:86843600-86860600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:86843600-86860800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:86844800-86855000 Weak transcription Thymus Thymus
16 chr1:86844800-86859200 Weak transcription Brain Germinal Matrix brain
17 chr1:86844800-86861000 Weak transcription Fetal Intestine Small intestine
18 chr1:86845000-86855000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:86845000-86859200 Weak transcription NH-A brain
20 chr1:86845000-86859400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:86845000-86860200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:86845000-86860600 Weak transcription Fetal Thymus thymus
23 chr1:86845000-86860800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:86845200-86859400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:86846600-86860400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:86848800-86861000 Weak transcription Primary B cells from cord blood blood
27 chr1:86849000-86858600 Weak transcription NHDF-Ad bronchial
28 chr1:86849200-86855000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:86849200-86860200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr1:86849200-86860800 Weak transcription Primary hematopoietic stem cells blood
31 chr1:86849400-86855000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:86849800-86854800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:86849800-86854800 Weak transcription Dnd41 blood
34 chr1:86851800-86859800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:86852400-86860600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:86853200-86855000 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr1:86853400-86855000 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr1:86853400-86857200 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr1:86853600-86855800 Enhancers Muscle Satellite Cultured Cells --
40 chr1:86853800-86855000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:86853800-86857400 Enhancers Primary T helper cells fromperipheralblood blood
42 chr1:86854000-86854800 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr1:86854000-86855000 Enhancers Primary T cells from cord blood blood
44 chr1:86854000-86855400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:86854000-86855600 Enhancers Adipose Nuclei Adipose
46 chr1:86854000-86855800 Enhancers Pancreatic Islets Pancreatic Islet
47 chr1:86854400-86854800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:86854400-86854800 Enhancers Primary T helper cells PMA-I stimulated --
49 chr1:86854400-86855000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:86854400-86855200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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