The 2.0 version of rSNPBase

Variant report

Variant rs58658794
Chromosome Location chr1:86894879-86894880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86887200-86895000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:86889800-86895200 Weak transcription Psoas Muscle Psoas
3 chr1:86890200-86895200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:86890400-86895000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:86890600-86903000 Weak transcription Esophagus oesophagus
6 chr1:86893000-86895200 Genic enhancers NHEK skin
7 chr1:86894200-86897400 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr1:86894400-86895000 Enhancers Spleen Spleen
9 chr1:86894400-86895800 Enhancers Hela-S3 cervix
10 chr1:86894400-86895800 Genic enhancers HMEC breast
11 chr1:86894400-86896200 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr1:86894400-86896400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:86894400-86896600 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr1:86894400-86896600 Enhancers Sigmoid Colon Sigmoid Colon
15 chr1:86894400-86896600 Enhancers Dnd41 blood
16 chr1:86894400-86897000 Enhancers Primary monocytes fromperipheralblood blood
17 chr1:86894400-86900200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:86894600-86895000 Flanking Active TSS Fetal Lung lung
19 chr1:86894600-86895200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:86894600-86895400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:86894600-86896600 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr1:86894600-86896600 Enhancers Osteobl bone
23 chr1:86894800-86895000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:86894800-86895000 Enhancers Placenta Placenta
25 chr1:86894800-86895000 Enhancers Small Intestine intestine
26 chr1:86894800-86895000 Enhancers HSMMtube muscle
27 chr1:86894800-86895200 Enhancers Aorta Aorta
28 chr1:86894800-86895600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:86894800-86895800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:86894800-86895800 Enhancers Rectal Mucosa Donor 29 rectum
31 chr1:86894800-86896000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:86894800-86896000 Enhancers Fetal Thymus thymus
33 chr1:86894800-86896200 Enhancers Primary T cells from cord blood blood
34 chr1:86894800-86896200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:86894800-86896200 Enhancers Adipose Nuclei Adipose
36 chr1:86894800-86896400 Enhancers Primary hematopoietic stem cells blood
37 chr1:86894800-86896400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr1:86894800-86896400 Enhancers NHLF lung
39 chr1:86894800-86896600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:86894800-86897200 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015