The 2.0 version of rSNPBase

Variant report

Variant rs58067327
Chromosome Location chr17:46562809-46562810
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46554200-46564600 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr17:46555000-46566000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr17:46559200-46566200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr17:46560800-46564600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr17:46560800-46566000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr17:46560800-46566400 Enhancers HMEC breast
7 chr17:46561200-46564000 Weak transcription Adipose Nuclei Adipose
8 chr17:46561200-46566000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr17:46561200-46566200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr17:46561200-46566200 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr17:46561400-46563200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr17:46561400-46566600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr17:46561400-46569400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr17:46561400-46569600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr17:46561800-46563800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr17:46561800-46563800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr17:46561800-46564800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr17:46561800-46566000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr17:46561800-46567400 Weak transcription Colon Smooth Muscle Colon
20 chr17:46562000-46563200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr17:46562000-46563800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr17:46562000-46563800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr17:46562000-46563800 Weak transcription Placenta Amnion Placenta Amnion
24 chr17:46562000-46563800 Enhancers HSMM muscle
25 chr17:46562000-46563800 Enhancers Osteobl bone
26 chr17:46562000-46564800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr17:46562000-46565000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr17:46562000-46567600 Weak transcription Rectal Smooth Muscle rectum
29 chr17:46562000-46569800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr17:46562200-46563200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr17:46562200-46563200 Weak transcription Primary hematopoietic stem cells blood
32 chr17:46562200-46563800 Enhancers Muscle Satellite Cultured Cells --
33 chr17:46562200-46563800 Weak transcription A549 lung
34 chr17:46562200-46563800 Enhancers HSMMtube muscle
35 chr17:46562200-46565000 Enhancers NH-A brain
36 chr17:46562400-46563800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr17:46562400-46563800 Enhancers NHDF-Ad bronchial
38 chr17:46562400-46564800 Enhancers NHLF lung
39 chr17:46562400-46567800 Weak transcription GM12878-XiMat blood
40 chr17:46562600-46563000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr17:46562600-46563600 Weak transcription K562 blood
42 chr17:46562600-46564200 Enhancers NHEK skin
43 chr17:46562800-46563800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015