Variant report

Variant	rs58180102
Chromosome Location	chr1:56651891-56651892
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs56248222	1.00[AMR][1000 genomes]
rs56394331	1.00[AMR][1000 genomes]
rs59073332	1.00[AMR][1000 genomes]
rs59121815	1.00[AMR][1000 genomes]
rs59741771	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61213965	1.00[AMR][1000 genomes]
rs6588604	1.00[AMR][1000 genomes]
rs6689869	1.00[AMR][1000 genomes]
rs74072808	1.00[AMR][1000 genomes]
rs74072853	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74072892	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74072896	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74075217	1.00[AMR][1000 genomes]
rs74075221	1.00[AMR][1000 genomes]
rs74075222	1.00[AMR][1000 genomes]
rs74075224	1.00[AMR][1000 genomes]
rs74075225	1.00[AMR][1000 genomes]
rs74075226	1.00[AMR][1000 genomes]
rs74075233	1.00[AMR][1000 genomes]
rs74075234	1.00[AMR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56645600-56654000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:56646800-56653800	Weak transcription	Fetal Muscle Leg	muscle
3	chr1:56647000-56655800	Weak transcription	Aorta	Aorta
4	chr1:56647200-56655000	Weak transcription	Fetal Kidney	kidney
5	chr1:56647600-56653000	Weak transcription	Fetal Lung	lung
6	chr1:56647600-56653800	Weak transcription	NHDF-Ad	bronchial
7	chr1:56647800-56654200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr1:56647800-56654200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr1:56647800-56654600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr1:56649800-56653800	Weak transcription	HepG2	liver
11	chr1:56651200-56652200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:56651200-56652200	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr1:56651200-56652200	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr1:56651200-56652200	Enhancers	Fetal Stomach	stomach
15	chr1:56651200-56652400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr1:56651400-56652000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chr1:56651400-56652200	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr1:56651600-56653000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr1:56651600-56653000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr1:56651800-56652200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr1:56651800-56652200	Enhancers	Brain Substantia Nigra	brain
22	chr1:56651800-56652400	Enhancers	Brain Hippocampus Middle	brain
23	chr1:56651800-56654000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr1:56651800-56654400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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