Variant report

Variant	rs74072808
Chromosome Location	chr1:56529340-56529341
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs4927301	0.83[AFR][1000 genomes]
rs56248222	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56394331	1.00[AMR][1000 genomes]
rs58180102	1.00[AMR][1000 genomes]
rs59073332	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59121815	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59641326	1.00[AMR][1000 genomes]
rs59741771	1.00[AMR][1000 genomes]
rs61213965	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6588604	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6689869	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74072853	1.00[AMR][1000 genomes]
rs74072892	1.00[AMR][1000 genomes]
rs74072896	1.00[AMR][1000 genomes]
rs74075204	1.00[AMR][1000 genomes]
rs74075209	1.00[AMR][1000 genomes]
rs74075217	1.00[AMR][1000 genomes]
rs74075221	1.00[AMR][1000 genomes]
rs74075222	1.00[AMR][1000 genomes]
rs74075224	1.00[AMR][1000 genomes]
rs74075225	1.00[AMR][1000 genomes]
rs74075226	1.00[AMR][1000 genomes]
rs74075233	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74075234	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56518200-56540000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:56521400-56534600	Weak transcription	Psoas Muscle	Psoas
3	chr1:56522800-56529400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:56522800-56529800	Weak transcription	Osteobl	bone
5	chr1:56525600-56530400	Enhancers	Placenta	Placenta
6	chr1:56526000-56531200	Weak transcription	Ovary	ovary
7	chr1:56526200-56532000	Weak transcription	Aorta	Aorta
8	chr1:56526600-56529800	Weak transcription	Esophagus	oesophagus
9	chr1:56526800-56529800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr1:56526800-56533800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr1:56527000-56529800	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr1:56527200-56530600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr1:56527600-56531800	Enhancers	HMEC	breast
14	chr1:56527800-56529600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr1:56528000-56529800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr1:56528000-56531800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr1:56528200-56529600	Enhancers	Adipose Nuclei	Adipose
18	chr1:56528200-56530200	Enhancers	Brain Hippocampus Middle	brain
19	chr1:56528200-56530600	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr1:56528600-56529400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr1:56528800-56530600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr1:56529000-56530200	Enhancers	Brain Cingulate Gyrus	brain
23	chr1:56529000-56530600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr1:56529000-56531800	Enhancers	NHEK	skin
25	chr1:56529000-56532000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr1:56529200-56529600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
27	chr1:56529200-56529600	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr1:56529200-56530200	Enhancers	Brain Anterior Caudate	brain
29	chr1:56529200-56530200	Enhancers	Fetal Muscle Leg	muscle
30	chr1:56529200-56532200	Enhancers	NHLF	lung
31	chr1:56529200-56532400	Enhancers	HSMM	muscle
32	chr1:56529200-56532400	Enhancers	HSMMtube	muscle
33	chr1:56529200-56540400	Enhancers	NHDF-Ad	bronchial

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