Variant report

Variant rs58233704
Chromosome Location chr19:57004567-57004568
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56990800-57010000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:56991000-57005400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:56991200-57006800 Weak transcription Muscle Satellite Cultured Cells --
4 chr19:56991200-57006800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr19:56992000-57009400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
6 chr19:56992000-57009800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
7 chr19:56992400-57004800 Weak transcription Right Ventricle heart
8 chr19:56996400-57005200 Weak transcription Fetal Stomach stomach
9 chr19:56998600-57008800 ZNF genes & repeats Primary hematopoietic stem cells blood
10 chr19:56999600-57005400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:56999800-57006000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr19:57001000-57005600 Weak transcription HSMM muscle
13 chr19:57001800-57005800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
14 chr19:57002200-57005400 Weak transcription Left Ventricle heart
15 chr19:57002200-57005400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr19:57002200-57005600 Weak transcription Stomach Smooth Muscle stomach
17 chr19:57002800-57006800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr19:57003000-57005400 Weak transcription H1 Cell Line embryonic stem cell
19 chr19:57003000-57018800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr19:57003200-57018400 Weak transcription Osteobl bone
21 chr19:57003600-57004600 Weak transcription Fetal Muscle Trunk muscle
22 chr19:57003600-57004600 Weak transcription Ovary ovary
23 chr19:57003600-57005200 Weak transcription Fetal Muscle Leg muscle
24 chr19:57003600-57006800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr19:57003600-57017000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr19:57003800-57004600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr19:57003800-57005400 Weak transcription HSMMtube muscle
28 chr19:57003800-57005600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr19:57003800-57006800 Weak transcription Placenta Amnion Placenta Amnion
30 chr19:57003800-57011600 Weak transcription Fetal Heart heart
31 chr19:57004200-57005400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr19:57004400-57005600 ZNF genes & repeats Psoas Muscle Psoas
33 chr19:57004400-57006800 Weak transcription Fetal Brain Male brain
34 chr19:57004400-57008800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood

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