The 2.0 version of rSNPBase

Variant report

Variant rs58412027
Chromosome Location chr5:126303888-126303889
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126286000-126305200 Weak transcription Left Ventricle heart
2 chr5:126297800-126307400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr5:126299800-126312000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:126300000-126305600 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr5:126300000-126306400 Weak transcription Right Atrium heart
6 chr5:126300400-126308200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:126300800-126305200 Weak transcription Right Ventricle heart
8 chr5:126301000-126307400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr5:126301000-126308800 Weak transcription Small Intestine intestine
10 chr5:126301200-126304400 Weak transcription Primary B cells from cord blood blood
11 chr5:126301200-126305200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:126301200-126306000 Weak transcription HSMMtube muscle
13 chr5:126301200-126306200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr5:126301200-126308200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:126301400-126306000 Weak transcription NH-A brain
16 chr5:126301400-126306200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr5:126301400-126306400 Weak transcription Stomach Mucosa stomach
18 chr5:126301600-126304400 Weak transcription Primary B cells from peripheral blood blood
19 chr5:126301600-126308000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr5:126301800-126305000 Weak transcription Primary hematopoietic stem cells blood
21 chr5:126302000-126304600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr5:126302000-126305400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr5:126302000-126312400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr5:126302400-126305200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr5:126302400-126306200 Weak transcription NHLF lung
26 chr5:126302600-126305400 Weak transcription HUVEC blood vessel
27 chr5:126302600-126305600 Weak transcription Osteobl bone
28 chr5:126302600-126305800 Weak transcription Muscle Satellite Cultured Cells --
29 chr5:126302600-126306000 Weak transcription HSMM muscle
30 chr5:126303600-126304200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:126303600-126304400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:126303600-126306200 Enhancers K562 blood
33 chr5:126303600-126306400 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015