The 2.0 version of rSNPBase

Variant report

Variant rs58473751
Chromosome Location chr3:141127710-141127711
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141122000-141128600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr3:141122000-141129200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:141122000-141130200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:141122000-141131800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:141122200-141128800 Weak transcription Fetal Thymus thymus
6 chr3:141122200-141129400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr3:141122400-141127800 Genic enhancers Placenta Placenta
8 chr3:141122600-141128200 Strong transcription Fetal Intestine Large intestine
9 chr3:141122600-141130400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr3:141122600-141130400 Genic enhancers NH-A brain
11 chr3:141122800-141129400 Enhancers Fetal Heart heart
12 chr3:141123000-141127800 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr3:141123000-141128000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:141123000-141128200 Genic enhancers A549 lung
15 chr3:141123200-141129200 Genic enhancers Primary T cells fromperipheralblood blood
16 chr3:141123200-141130400 Genic enhancers Osteobl bone
17 chr3:141123200-141130600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr3:141123200-141130600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:141123600-141128600 Enhancers Placenta Amnion Placenta Amnion
20 chr3:141123800-141128400 Weak transcription Aorta Aorta
21 chr3:141123800-141128400 Weak transcription Psoas Muscle Psoas
22 chr3:141123800-141128400 Weak transcription Spleen Spleen
23 chr3:141123800-141128600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr3:141123800-141128800 Weak transcription Esophagus oesophagus
25 chr3:141123800-141128800 Strong transcription Fetal Muscle Trunk muscle
26 chr3:141123800-141129200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr3:141123800-141129200 Weak transcription Fetal Brain Female brain
28 chr3:141123800-141129400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr3:141123800-141130200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr3:141123800-141131400 Weak transcription Thymus Thymus
31 chr3:141124000-141127800 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr3:141124000-141129400 Weak transcription Primary T cells from cord blood blood
33 chr3:141124000-141131000 Weak transcription Primary B cells from cord blood blood
34 chr3:141124200-141128600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr3:141124400-141129200 Genic enhancers NHLF lung
36 chr3:141124600-141128600 Genic enhancers Muscle Satellite Cultured Cells --
37 chr3:141124600-141129200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr3:141124800-141129000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr3:141124800-141130000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr3:141125000-141128200 Weak transcription K562 blood
41 chr3:141125000-141131000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr3:141125200-141129600 Genic enhancers NHDF-Ad bronchial
43 chr3:141125400-141128200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:141125400-141128200 Weak transcription Brain Angular Gyrus brain
45 chr3:141125400-141128200 Weak transcription Brain Substantia Nigra brain
46 chr3:141125400-141128400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr3:141125400-141128400 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr3:141125400-141128800 Weak transcription Colonic Mucosa Colon
49 chr3:141125400-141131200 Weak transcription Brain Germinal Matrix brain
50 chr3:141125600-141128000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015