The 2.0 version of rSNPBase

Variant report

Variant rs58620450
Chromosome Location chr6:107056526-107056527
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106996400-107074000 Weak transcription Fetal Kidney kidney
2 chr6:107010200-107064600 Weak transcription A549 lung
3 chr6:107018400-107066400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:107018400-107076400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr6:107018800-107076200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr6:107019000-107076200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr6:107019800-107076400 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr6:107022000-107076400 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr6:107023400-107068800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr6:107023400-107076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:107030800-107076800 Weak transcription Small Intestine intestine
12 chr6:107031200-107058800 Weak transcription Psoas Muscle Psoas
13 chr6:107031200-107077000 Weak transcription Spleen Spleen
14 chr6:107031400-107065200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:107031400-107076200 Weak transcription Fetal Muscle Trunk muscle
16 chr6:107031400-107076600 Weak transcription Brain Angular Gyrus brain
17 chr6:107031800-107076600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr6:107033000-107076600 Weak transcription Aorta Aorta
19 chr6:107033200-107061000 Weak transcription Colon Smooth Muscle Colon
20 chr6:107034400-107057400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr6:107035400-107076600 Weak transcription Right Ventricle heart
22 chr6:107035800-107070400 Weak transcription Brain Inferior Temporal Lobe brain
23 chr6:107035800-107070400 Weak transcription Fetal Lung lung
24 chr6:107039200-107076400 Weak transcription Brain Germinal Matrix brain
25 chr6:107039200-107076600 Weak transcription Fetal Muscle Leg muscle
26 chr6:107039600-107076600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr6:107039600-107076600 Weak transcription Fetal Stomach stomach
28 chr6:107039800-107076200 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:107039800-107076400 Weak transcription Stomach Smooth Muscle stomach
30 chr6:107040000-107058800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr6:107040000-107059000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr6:107040000-107061400 Weak transcription Primary hematopoietic stem cells blood
33 chr6:107040000-107062800 Weak transcription NHLF lung
34 chr6:107040000-107065200 Weak transcription HepG2 liver
35 chr6:107040000-107066000 Weak transcription Brain Anterior Caudate brain
36 chr6:107040000-107068400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr6:107040000-107076600 Weak transcription Brain Cingulate Gyrus brain
38 chr6:107040000-107076600 Weak transcription Fetal Intestine Large intestine
39 chr6:107040200-107057400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr6:107040200-107058800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr6:107040200-107064000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr6:107040200-107064600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:107040200-107064800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr6:107040200-107065000 Weak transcription K562 blood
45 chr6:107040200-107068400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr6:107040200-107070600 Weak transcription Dnd41 blood
47 chr6:107040200-107076200 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr6:107040200-107076400 Weak transcription Brain Substantia Nigra brain
49 chr6:107040200-107076600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr6:107040200-107076600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015