The 2.0 version of rSNPBase

Variant report

Variant rs56725742
Chromosome Location chr6:107045176-107045177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106996400-107074000 Weak transcription Fetal Kidney kidney
2 chr6:107010200-107064600 Weak transcription A549 lung
3 chr6:107018000-107052600 Weak transcription Colonic Mucosa Colon
4 chr6:107018400-107066400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:107018400-107076400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr6:107018800-107076200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr6:107019000-107076200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr6:107019800-107076400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr6:107022000-107076400 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr6:107023400-107050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:107023400-107068800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:107023400-107076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr6:107029600-107052600 Weak transcription Pancreas Pancrea
14 chr6:107030800-107076800 Weak transcription Small Intestine intestine
15 chr6:107031200-107052200 Weak transcription Thymus Thymus
16 chr6:107031200-107052600 Weak transcription Gastric stomach
17 chr6:107031200-107052800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr6:107031200-107058800 Weak transcription Psoas Muscle Psoas
19 chr6:107031200-107077000 Weak transcription Spleen Spleen
20 chr6:107031400-107048000 Weak transcription Lung lung
21 chr6:107031400-107065200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr6:107031400-107076200 Weak transcription Fetal Muscle Trunk muscle
23 chr6:107031400-107076600 Weak transcription Brain Angular Gyrus brain
24 chr6:107031800-107076600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr6:107032600-107054000 Weak transcription H1 Cell Line embryonic stem cell
26 chr6:107033000-107076600 Weak transcription Aorta Aorta
27 chr6:107033200-107061000 Weak transcription Colon Smooth Muscle Colon
28 chr6:107034400-107057400 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr6:107035000-107047800 Weak transcription Fetal Brain Male brain
30 chr6:107035400-107076600 Weak transcription Right Ventricle heart
31 chr6:107035600-107054600 Weak transcription Hela-S3 cervix
32 chr6:107035800-107070400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr6:107035800-107070400 Weak transcription Fetal Lung lung
34 chr6:107036000-107046600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:107036000-107051800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr6:107037200-107053800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr6:107039200-107076400 Weak transcription Brain Germinal Matrix brain
38 chr6:107039200-107076600 Weak transcription Fetal Muscle Leg muscle
39 chr6:107039600-107046800 Weak transcription Primary B cells from cord blood blood
40 chr6:107039600-107052600 Weak transcription Fetal Intestine Small intestine
41 chr6:107039600-107076600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr6:107039600-107076600 Weak transcription Fetal Stomach stomach
43 chr6:107039800-107048800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr6:107039800-107051800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr6:107039800-107052200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr6:107039800-107076200 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr6:107039800-107076400 Weak transcription Stomach Smooth Muscle stomach
48 chr6:107040000-107046800 Weak transcription Primary B cells from peripheral blood blood
49 chr6:107040000-107058800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr6:107040000-107059000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015