Variant report

Variant	rs58769063
Chromosome Location	chr11:74925473-74925474
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74925056..74926007-chr11:74958917..74960409,9	MCF-7	breast:
2	chr11:74925169..74925939-chr11:74981714..74982378,2	MCF-7	breast:
3	chr11:74855364..74855904-chr11:74925145..74925839,2	K562	blood:
4	chr11:74851348..74851882-chr11:74925468..74926027,2	MCF-7	breast:
5	chr11:74925158..74925973-chr11:74952278..74953089,3	K562	blood:
6	chr11:74924673..74926005-chr11:74952370..74953068,4	MCF-7	breast:
7	chr11:74923912..74926084-chr11:74940917..74943101,2	K562	blood:
8	chr11:74918789..74921667-chr11:74922172..74926062,5	K562	blood:
9	chr11:74925000..74926013-chr11:74952324..74953354,12	MCF-7	breast:
10	chr11:74925137..74925829-chr11:74935232..74935799,2	MCF-7	breast:
11	chr11:74925132..74926009-chr11:74959386..74960324,3	K562	blood:
12	chr11:74923854..74925700-chr11:74949115..74951246,2	K562	blood:
13	chr11:74924940..74926021-chr11:74959362..74960424,4	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs17133818	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17133831	0.88[ASN][1000 genomes]
rs17133844	0.88[ASN][1000 genomes]
rs17133848	0.88[ASN][1000 genomes]
rs1801906	0.87[ASN][1000 genomes]
rs2035208	0.88[ASN][1000 genomes]
rs3781726	0.95[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3781727	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs41298121	0.87[ASN][1000 genomes]
rs56253315	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs56738638	0.88[ASN][1000 genomes]
rs57279023	0.88[ASN][1000 genomes]
rs61443691	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73488760	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73488764	0.88[ASN][1000 genomes]
rs7924924	0.88[ASN][1000 genomes]
rs7951787	0.88[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74925400-74925600	Enhancers	Pancreas	Pancrea
2	chr11:74925400-74925800	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr11:74925400-74925800	Enhancers	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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