Variant report

No data

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:74915702..74917024-chr11:74959078..74959858,3	K562	blood:
2	chr11:74855150..74856113-chr11:74915822..74916648,7	MCF-7	breast:
3	chr11:74640541..74641099-chr11:74915722..74916622,2	MCF-7	breast:
4	chr11:74854818..74856886-chr11:74915338..74916882,2	K562	blood:
5	chr11:74892413..74894687-chr11:74914535..74916760,2	K562	blood:
6	chr11:74733606..74734570-chr11:74915675..74916673,7	MCF-7	breast:
7	chr11:74855198..74856149-chr11:74915693..74916307,4	K562	blood:
8	chr11:74733674..74734604-chr11:74915406..74916752,8	K562	blood:
9	chr11:74869678..74870459-chr11:74915424..74916683,3	MCF-7	breast:
10	chr11:74910975..74912649-chr11:74914593..74917010,2	K562	blood:
11	chr11:74915518..74916204-chr11:74952277..74953016,2	MCF-7	breast:
12	chr11:74640507..74641429-chr11:74915550..74916662,6	K562	blood:
13	chr11:74854240..74856798-chr11:74915145..74916958,23	MCF-7	breast:
14	chr11:74851279..74852245-chr11:74915585..74916634,10	MCF-7	breast:
15	chr11:74915763..74916910-chr11:74959359..74960694,5	MCF-7	breast:
16	chr11:74856309..74859040-chr11:74914787..74916343,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARRB1-1	chr11:74915055-74917254	NONHSAT023082
2	lnc-NEU3-3	chr11:74914426-74917299	NONHSAT023081

No data

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17133818	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17133831	0.88[ASN][1000 genomes]
rs17133844	0.83[CHB][hapmap];0.87[ASN][1000 genomes]
rs17133848	0.83[CHB][hapmap];0.89[MEX][hapmap];0.87[ASN][1000 genomes]
rs1801906	0.88[ASN][1000 genomes]
rs2035208	0.83[CHB][hapmap];0.88[ASN][1000 genomes]
rs2279129	0.88[CHB][hapmap]
rs2279130	0.88[CHB][hapmap]
rs2282600	0.88[CHB][hapmap]
rs3781723	1.00[CEU][hapmap]
rs3781726	0.91[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3907207	0.81[JPT][hapmap]
rs41298121	0.88[ASN][1000 genomes]
rs5006027	0.81[JPT][hapmap]
rs56253315	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs56738638	0.88[ASN][1000 genomes]
rs57279023	0.88[ASN][1000 genomes]
rs58769063	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61443691	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73488760	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73488764	0.88[ASN][1000 genomes]
rs7924924	0.88[ASN][1000 genomes]
rs7951787	0.83[CHB][hapmap];0.89[MEX][hapmap];0.88[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74907800-74918000	Weak transcription	Right Atrium	heart
2	chr11:74911400-74919800	Weak transcription	Spleen	Spleen
3	chr11:74912000-74916800	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr11:74913800-74918000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr11:74914000-74916800	Enhancers	Liver	Liver
6	chr11:74914200-74916800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr11:74914200-74917200	Genic enhancers	Fetal Intestine Small	intestine
8	chr11:74914400-74917200	Enhancers	Fetal Intestine Large	intestine
9	chr11:74914800-74916200	Flanking Active TSS	HepG2	liver
10	chr11:74915400-74916200	Enhancers	Fetal Muscle Trunk	muscle
11	chr11:74915400-74916400	Enhancers	Fetal Muscle Leg	muscle
12	chr11:74915400-74916400	Bivalent Enhancer	Placenta	Placenta
13	chr11:74915800-74919600	Weak transcription	Lung	lung
14	chr11:74916000-74916200	Enhancers	Brain Substantia Nigra	brain
15	chr11:74916000-74916400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
16	chr11:74916000-74918600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:74916000-74919600	Weak transcription	Pancreas	Pancrea
18	chr11:74916000-74920800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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