The 2.0 version of rSNPBase

Variant report

Variant rs58966246
Chromosome Location chr1:220304121-220304122
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220268400-220330200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:220269400-220330000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:220278600-220316200 Weak transcription Pancreas Pancrea
4 chr1:220281400-220307200 Weak transcription Brain Angular Gyrus brain
5 chr1:220281400-220307800 Weak transcription Psoas Muscle Psoas
6 chr1:220281400-220314400 Weak transcription Fetal Brain Male brain
7 chr1:220284600-220305600 Weak transcription Small Intestine intestine
8 chr1:220284600-220307400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:220284600-220307800 Weak transcription Spleen Spleen
10 chr1:220284600-220313000 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:220284600-220313600 Weak transcription Gastric stomach
12 chr1:220284600-220324600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr1:220288200-220324600 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr1:220288400-220310200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:220289600-220307800 Weak transcription Thymus Thymus
16 chr1:220289800-220306400 Weak transcription NHEK skin
17 chr1:220289800-220307400 Weak transcription HSMMtube muscle
18 chr1:220289800-220307800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:220290400-220304600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr1:220290400-220307800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:220290800-220307800 Weak transcription Lung lung
22 chr1:220291200-220314400 Weak transcription NH-A brain
23 chr1:220291600-220306200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:220295200-220309000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:220295400-220310600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:220295800-220306000 Weak transcription Aorta Aorta
27 chr1:220296000-220327600 Weak transcription Colonic Mucosa Colon
28 chr1:220296600-220323200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:220297200-220304400 Strong transcription Fetal Muscle Leg muscle
30 chr1:220297600-220304400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:220297800-220304400 Strong transcription Primary B cells from cord blood blood
32 chr1:220298000-220304800 Strong transcription Primary T cells fromperipheralblood blood
33 chr1:220298200-220305800 Weak transcription Ovary ovary
34 chr1:220298200-220307800 Weak transcription Colon Smooth Muscle Colon
35 chr1:220298400-220307200 Weak transcription Fetal Heart heart
36 chr1:220298600-220304400 Strong transcription Primary B cells from peripheral blood blood
37 chr1:220298600-220304400 Strong transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:220298600-220304400 Strong transcription Liver Liver
39 chr1:220298600-220304600 Strong transcription Adipose Nuclei Adipose
40 chr1:220298600-220304600 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr1:220298600-220321600 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:220298800-220309000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:220298800-220310400 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr1:220298800-220311600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:220298800-220334600 Strong transcription Fetal Thymus thymus
46 chr1:220299000-220309000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:220299000-220321200 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr1:220299000-220322800 Weak transcription Stomach Mucosa stomach
49 chr1:220299200-220307200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr1:220299600-220304400 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015