Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1420948	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1420952	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16943779	1.00[AMR][1000 genomes]
rs16943782	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16943789	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16943806	1.00[AMR][1000 genomes]
rs16943849	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4800283	1.00[AMR][1000 genomes]
rs4800816	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56387355	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57518255	1.00[AMR][1000 genomes]
rs59993739	1.00[AFR][1000 genomes]
rs61020210	1.00[AFR][1000 genomes]
rs73396752	0.87[AFR][1000 genomes]
rs73396756	1.00[AFR][1000 genomes]
rs73396787	1.00[AFR][1000 genomes]
rs73412987	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73413000	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414903	1.00[AMR][1000 genomes]
rs73414911	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414942	1.00[ASN][1000 genomes]
rs73414945	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73414946	1.00[AFR][1000 genomes]
rs73944952	1.00[AMR][1000 genomes]
rs73944973	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761996	chr18:24866083-25818618	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:25195200-25198600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr18:25196600-25198400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr18:25197800-25199200	Enhancers	Liver	Liver

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