Variant report

Variant	rs5916911
Chromosome Location	chrX:104672794-104672795
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1156923	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs1292802	1.00[YRI][hapmap]
rs1321380	1.00[CEU][hapmap]
rs1321381	1.00[CEU][hapmap]
rs1321384	1.00[YRI][hapmap]
rs1321388	1.00[CEU][hapmap]
rs1406992	1.00[CEU][hapmap]
rs1590197	1.00[CHB][hapmap]
rs16984807	1.00[CHB][hapmap]
rs1736867	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs1736868	1.00[CHB][hapmap]
rs1741712	1.00[CHB][hapmap]
rs1741713	1.00[CHB][hapmap]
rs1741715	1.00[CHB][hapmap]
rs210726	1.00[YRI][hapmap]
rs210729	1.00[YRI][hapmap]
rs210730	1.00[YRI][hapmap]
rs210731	1.00[YRI][hapmap]
rs210734	1.00[YRI][hapmap]
rs222582	1.00[CEU][hapmap]
rs222584	1.00[CEU][hapmap]
rs222585	1.00[CEU][hapmap]
rs222588	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs222597	1.00[CEU][hapmap]
rs222601	1.00[CEU][hapmap]
rs2752573	1.00[CHB][hapmap]
rs400761	1.00[YRI][hapmap]
rs4826920	1.00[CEU][hapmap]
rs4826922	1.00[YRI][hapmap]
rs5916899	1.00[CEU][hapmap]
rs5916903	1.00[CEU][hapmap]
rs5916908	1.00[YRI][hapmap]
rs5916928	1.00[YRI][hapmap]
rs5916929	1.00[YRI][hapmap]
rs5962502	1.00[CHB][hapmap]
rs6523840	1.00[CEU][hapmap]
rs6616582	1.00[CEU][hapmap]
rs980736	1.00[CHB][hapmap]
rs986468	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs991444	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432352	chrX:104346855-104831855	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:104670800-104674200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chrX:104671000-104674200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chrX:104671200-104674200	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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