Variant report

Variant	rs59233903
Chromosome Location	chr6:109735989-109735990
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11963133	0.81[ASN][1000 genomes]
rs1321207	1.00[EUR][1000 genomes]
rs28575685	0.94[ASN][1000 genomes]
rs3757227	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3757233	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3778473	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57456332	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57919077	0.94[ASN][1000 genomes]
rs58026913	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58535912	0.94[ASN][1000 genomes]
rs6904271	0.94[ASN][1000 genomes]
rs6922897	0.94[ASN][1000 genomes]
rs73762717	0.94[ASN][1000 genomes]
rs7753224	1.00[EUR][1000 genomes]
rs9400278	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9487133	1.00[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109705000-109745200	Weak transcription	Fetal Kidney	kidney
2	chr6:109707000-109755400	Weak transcription	Fetal Intestine Small	intestine
3	chr6:109712800-109736200	Weak transcription	Left Ventricle	heart
4	chr6:109721200-109760600	Weak transcription	Fetal Brain Female	brain
5	chr6:109724400-109750400	Weak transcription	Ovary	ovary
6	chr6:109725000-109736600	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr6:109725800-109760800	Weak transcription	Brain Anterior Caudate	brain
8	chr6:109731400-109745200	Weak transcription	Pancreas	Pancrea
9	chr6:109735200-109750200	Weak transcription	Fetal Muscle Leg	muscle
10	chr6:109735600-109750000	Weak transcription	Brain Hippocampus Middle	brain
11	chr6:109735800-109736400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
12	chr6:109735800-109742000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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