Variant report

Variant	rs59512855
Chromosome Location	chr3:68713057-68713058
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10510971	0.80[ASN][1000 genomes]
rs11128090	0.82[EUR][1000 genomes]
rs12054044	0.82[EUR][1000 genomes]
rs12629295	0.82[EUR][1000 genomes]
rs12633144	0.82[EUR][1000 genomes]
rs12635072	0.82[EUR][1000 genomes]
rs13062535	0.82[EUR][1000 genomes]
rs13066315	0.82[EUR][1000 genomes]
rs13071029	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs13083495	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs13084589	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs13087288	0.92[ASN][1000 genomes]
rs13093729	0.82[EUR][1000 genomes]
rs13095333	0.82[EUR][1000 genomes]
rs13097433	0.82[EUR][1000 genomes]
rs13099159	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1511888	0.81[AMR][1000 genomes]
rs17047942	0.94[EUR][1000 genomes]
rs17047968	0.82[EUR][1000 genomes]
rs17047978	0.82[EUR][1000 genomes]
rs17047979	0.82[EUR][1000 genomes]
rs17047991	0.82[EUR][1000 genomes]
rs1948291	0.82[EUR][1000 genomes]
rs1994592	0.82[EUR][1000 genomes]
rs1994593	0.82[EUR][1000 genomes]
rs34006637	0.82[EUR][1000 genomes]
rs34224188	0.81[AMR][1000 genomes]
rs34285930	0.82[EUR][1000 genomes]
rs34661976	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34668623	0.82[EUR][1000 genomes]
rs34720222	0.82[EUR][1000 genomes]
rs34919495	0.82[EUR][1000 genomes]
rs35132255	0.94[EUR][1000 genomes]
rs35270691	0.82[EUR][1000 genomes]
rs35336306	0.82[EUR][1000 genomes]
rs35586328	0.94[EUR][1000 genomes]
rs35740552	0.82[EUR][1000 genomes]
rs35768765	0.82[EUR][1000 genomes]
rs35912963	0.82[EUR][1000 genomes]
rs4855342	0.82[EUR][1000 genomes]
rs4855509	0.82[EUR][1000 genomes]
rs4855510	0.82[EUR][1000 genomes]
rs4855511	0.82[EUR][1000 genomes]
rs56909663	0.82[EUR][1000 genomes]
rs6763155	0.82[EUR][1000 genomes]
rs6774520	0.82[EUR][1000 genomes]
rs6774607	0.82[EUR][1000 genomes]
rs67984146	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6801847	0.82[EUR][1000 genomes]
rs71302144	0.82[EUR][1000 genomes]
rs71302145	0.82[EUR][1000 genomes]
rs71302146	0.82[EUR][1000 genomes]
rs71302148	0.82[EUR][1000 genomes]
rs71312515	0.81[AMR][1000 genomes]
rs7642323	0.82[EUR][1000 genomes]
rs8180031	0.94[EUR][1000 genomes]
rs9837907	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009857	chr3:68696340-68746434	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68711000-68715600	Weak transcription	Aorta	Aorta
2	chr3:68712000-68715400	Weak transcription	Stomach Smooth Muscle	stomach
3	chr3:68712800-68713800	Enhancers	Fetal Stomach	stomach
4	chr3:68713000-68713600	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr3:68713000-68713600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr3:68713000-68714200	Enhancers	Colon Smooth Muscle	Colon

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