Variant report

Variant	rs10510971
Chromosome Location	chr3:68681415-68681416
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs13061508	1.00[EUR][1000 genomes]
rs13071029	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13071343	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs13083495	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13084589	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13087288	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13099159	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1511888	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17047847	0.89[ASN][1000 genomes]
rs34224188	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34541684	0.84[ASN][1000 genomes]
rs34661976	0.80[ASN][1000 genomes]
rs4270511	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap]
rs4855492	0.89[ASN][1000 genomes]
rs59512855	0.80[ASN][1000 genomes]
rs6770575	1.00[CEU][hapmap]
rs6810150	1.00[CEU][hapmap]
rs71312515	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9825378	0.87[CHB][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68680400-68682200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:68680400-68682200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr3:68680600-68681600	Enhancers	H1 Cell Line	embryonic stem cell
4	chr3:68680600-68681800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
5	chr3:68680800-68681800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr3:68680800-68681800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
7	chr3:68680800-68682000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:68681000-68681600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr3:68681000-68682000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr3:68681000-68682200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr3:68681400-68681600	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr3:68681400-68681600	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr3:68681400-68682200	Enhancers	ES-I3 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links