Variant report

Variant	rs13071343
Chromosome Location	chr3:68595753-68595754
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10510971	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs13071029	0.85[AMR][1000 genomes]
rs13083495	0.85[AMR][1000 genomes]
rs13084589	0.85[AMR][1000 genomes]
rs13099159	0.85[AMR][1000 genomes]
rs1511888	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17047847	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2137182	0.89[CHB][hapmap]
rs34224188	0.85[AMR][1000 genomes]
rs34541684	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4270511	1.00[CEU][hapmap];0.82[CHB][hapmap]
rs4855492	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6770575	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap]
rs6809730	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs6810150	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap]
rs71312511	0.94[ASN][1000 genomes]
rs71312515	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv1828578	chr3:68595321-68641509	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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