Variant report

Variant	rs17047847
Chromosome Location	chr3:68610677-68610678
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10510971	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.89[ASN][1000 genomes]
rs13071029	0.93[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13071343	1.00[CEU][hapmap];0.83[CHB][hapmap];0.83[JPT][hapmap]
rs13083495	0.93[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13084589	0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs13087288	0.84[ASN][1000 genomes]
rs13099159	0.93[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1511888	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34224188	0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs34541684	0.91[ASN][1000 genomes]
rs4270511	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4855492	0.97[ASN][1000 genomes]
rs6770575	1.00[CEU][hapmap];0.83[JPT][hapmap]
rs6810150	1.00[CEU][hapmap];0.84[JPT][hapmap];0.80[YRI][hapmap]
rs71312511	0.83[ASN][1000 genomes]
rs71312515	0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9825378	0.87[CHB][hapmap];0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv1828578	chr3:68595321-68641509	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	nsv508223	chr3:68603630-68645355	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
4	nsv3862	chr3:68608012-68653563	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68610000-68612000	Enhancers	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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