Variant report
| Variant | rs59698523 |
|---|---|
| Chromosome Location | chr6:126733094-126733095 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:31)
| rs_ID | r2[population] |
|---|---|
| rs1159619 | 0.81[EUR][1000 genomes] |
| rs1361108 | 0.87[EUR][1000 genomes] |
| rs1361262 | 0.86[EUR][1000 genomes] |
| rs1490387 | 0.80[EUR][1000 genomes] |
| rs1490388 | 0.80[EUR][1000 genomes] |
| rs1538172 | 0.88[EUR][1000 genomes] |
| rs1578060 | 0.88[EUR][1000 genomes] |
| rs1602278 | 0.80[EUR][1000 genomes] |
| rs17754780 | 0.85[EUR][1000 genomes] |
| rs1907067 | 0.80[EUR][1000 genomes] |
| rs2027299 | 0.85[EUR][1000 genomes] |
| rs2039735 | 0.82[EUR][1000 genomes] |
| rs2045258 | 0.85[EUR][1000 genomes] |
| rs2050644 | 0.81[EUR][1000 genomes] |
| rs2326387 | 0.85[EUR][1000 genomes] |
| rs4422634 | 0.81[EUR][1000 genomes] |
| rs4895807 | 0.85[EUR][1000 genomes] |
| rs4895808 | 0.86[EUR][1000 genomes] |
| rs6907898 | 0.85[EUR][1000 genomes] |
| rs6919397 | 0.85[EUR][1000 genomes] |
| rs9321065 | 0.81[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs9375435 | 0.84[EUR][1000 genomes] |
| rs9375442 | 0.81[EUR][1000 genomes] |
| rs9375446 | 0.80[EUR][1000 genomes] |
| rs9388486 | 0.85[EUR][1000 genomes] |
| rs9388489 | 0.87[EUR][1000 genomes] |
| rs9388490 | 0.83[EUR][1000 genomes] |
| rs9398804 | 0.85[EUR][1000 genomes] |
| rs9401876 | 0.85[EUR][1000 genomes] |
| rs9401885 | 0.80[EUR][1000 genomes] |
| rs9491624 | 0.85[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:126732200-126733600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
