Variant report

Variant	rs4895807
Chromosome Location	chr6:126686513-126686514
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10457478	1.00[ASN][1000 genomes]
rs1159619	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12202204	1.00[ASN][1000 genomes]
rs1361108	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1361262	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1490384	1.00[ASN][1000 genomes]
rs1490387	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1490388	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1538172	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1578060	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1591805	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1602278	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17754780	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1907067	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2027299	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2039735	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2045258	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2050644	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2130603	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2326387	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34539692	1.00[ASN][1000 genomes]
rs4053271	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4422634	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4895808	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59698523	0.85[EUR][1000 genomes]
rs6907898	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6919397	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7738135	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9321065	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9375435	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9375442	0.87[EUR][1000 genomes]
rs9375446	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9388486	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9388487	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9388489	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9388490	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9398803	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9398804	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9401876	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9401885	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9491624	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:126665400-126702200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:126665400-126702200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:126678600-126694000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:126678800-126702400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:126681200-126688600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr6:126681600-126689200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr6:126681600-126694400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr6:126681600-126696600	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr6:126681600-126697800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:126683800-126686800	Weak transcription	Dnd41	blood
11	chr6:126686400-126686600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr6:126686400-126686800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr6:126686400-126687000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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