Variant report
| Variant | rs34539692 |
|---|---|
| Chromosome Location | chr6:126747110-126747111 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs10457478 | 0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1159619 | 1.00[ASN][1000 genomes] |
| rs12202204 | 0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1361108 | 1.00[ASN][1000 genomes] |
| rs1361262 | 1.00[ASN][1000 genomes] |
| rs1490384 | 1.00[ASN][1000 genomes] |
| rs1490387 | 1.00[ASN][1000 genomes] |
| rs1490388 | 1.00[ASN][1000 genomes] |
| rs1538172 | 1.00[ASN][1000 genomes] |
| rs1578060 | 1.00[ASN][1000 genomes] |
| rs1591805 | 1.00[ASN][1000 genomes] |
| rs1602278 | 1.00[ASN][1000 genomes] |
| rs17754780 | 1.00[ASN][1000 genomes] |
| rs1907067 | 1.00[ASN][1000 genomes] |
| rs2045258 | 1.00[ASN][1000 genomes] |
| rs2050644 | 1.00[ASN][1000 genomes] |
| rs2326387 | 1.00[ASN][1000 genomes] |
| rs4053271 | 1.00[ASN][1000 genomes] |
| rs4422634 | 1.00[ASN][1000 genomes] |
| rs4895807 | 1.00[ASN][1000 genomes] |
| rs4895808 | 1.00[ASN][1000 genomes] |
| rs6907898 | 1.00[ASN][1000 genomes] |
| rs6919397 | 1.00[ASN][1000 genomes] |
| rs7738135 | 1.00[ASN][1000 genomes] |
| rs9321065 | 1.00[ASN][1000 genomes] |
| rs9375435 | 1.00[ASN][1000 genomes] |
| rs9375446 | 1.00[ASN][1000 genomes] |
| rs9388486 | 1.00[ASN][1000 genomes] |
| rs9388487 | 1.00[ASN][1000 genomes] |
| rs9388489 | 1.00[ASN][1000 genomes] |
| rs9388490 | 1.00[ASN][1000 genomes] |
| rs9398803 | 1.00[ASN][1000 genomes] |
| rs9401885 | 1.00[ASN][1000 genomes] |
| rs9491624 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:126744000-126749000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
