Variant report

Variant	rs59792335
Chromosome Location	chr8:66970455-66970456
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:66967974..66973284-chr8:66974182..66976883,4	K562	blood:
2	chr8:66959527..66962365-chr8:66969544..66971577,2	K562	blood:
3	chr8:66970245..66971812-chr8:67339610..67342564,2	K562	blood:
4	chr8:66969033..66972090-chr8:67340125..67343185,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000147576	Chromatin interaction
ENSG00000179041	Chromatin interaction
ENSG00000246145	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16932461	1.00[ASN][1000 genomes]
rs16932465	0.87[ASN][1000 genomes]
rs16932468	1.00[ASN][1000 genomes]
rs28491110	0.87[ASN][1000 genomes]
rs4398895	0.87[ASN][1000 genomes]
rs56411320	1.00[ASN][1000 genomes]
rs58195552	0.87[ASN][1000 genomes]
rs61437839	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6472245	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7006394	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73691276	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66969600-66971200	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr8:66969600-66971200	Enhancers	Primary T helper cells PMA-I stimulated	--
3	chr8:66969600-66971200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr8:66969600-66971200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:66969600-66971400	Enhancers	Primary T cells from cord blood	blood
6	chr8:66969600-66971400	Enhancers	Primary T helper naive cells from peripheral blood	blood
7	chr8:66969600-66971400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr8:66969800-66970600	Weak transcription	Primary hematopoietic stem cells	blood
9	chr8:66969800-66970600	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr8:66969800-66971200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
11	chr8:66969800-66971200	Enhancers	Primary T helper cells fromperipheralblood	blood
12	chr8:66969800-66971200	Enhancers	Dnd41	blood
13	chr8:66969800-66971400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr8:66969800-66971600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr8:66970000-66971000	Enhancers	Primary T killer memory cells from peripheral blood	blood
16	chr8:66970000-66971200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr8:66970200-66970800	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr8:66970200-66970800	Enhancers	Primary T cells fromperipheralblood	blood
19	chr8:66970200-66971000	Enhancers	Primary hematopoietic stem cells short term culture	blood
20	chr8:66970200-66971200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
21	chr8:66970200-66971200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr8:66970200-66971200	Enhancers	Fetal Thymus	thymus
23	chr8:66970400-66971200	Enhancers	Thymus	Thymus

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